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Installation
Model
interscale.model.CombinedModel
interscale.model.GlobalModel
interscale.model.LocalModel
interscale.module.DualDecoderCombinedModule
interscale.module.CombinedModule
interscale.module.GIN
interscale.module.GCN
interscale.module.SCVILocalModule
interscale.module.PrecomputedEmbeddingModule
interscale.module.TransformerNodeEncoderHook
Plotting
Tools
interscale.evaluation.scale_cls_by_sample
interscale.evaluation.plot_all_spatial_net_streams
interscale.evaluation.plot_flow_clusters
interscale.evaluation.gene_loadings
interscale.evaluation.calculate_gene_ranks
Tutorials
Set up and download - Molecular cartography data from Legnini et al., 2023
Model training
Gene level evaluation
Changelog
Contributing guide
References
.md
.pdf
Plotting
Plotting
#
TODO
